mcf10a human breast epithelial cells Search Results


99
ATCC mcf10a human breast epithelial cell line
Mcf10a Human Breast Epithelial Cell Line, supplied by ATCC, used in various techniques. Bioz Stars score: 99/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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96
ATCC human breast epithelial cells
Human Breast Epithelial Cells, supplied by ATCC, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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93
ATCC breast non tumorigenic epithelial cell lines
Breast Non Tumorigenic Epithelial Cell Lines, supplied by ATCC, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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90
Lonza human non-cancerous mammary epithelial mcf-10a cell line
Human Non Cancerous Mammary Epithelial Mcf 10a Cell Line, supplied by Lonza, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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96
ATCC epithelial cell line
Epithelial Cell Line, supplied by ATCC, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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86
Procell Inc human mammary epithelial mcf 10a cells
Human Mammary Epithelial Mcf 10a Cells, supplied by Procell Inc, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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99
ATCC normal human mammary epithelial cells mcf 10 a
Normal Human Mammary Epithelial Cells Mcf 10 A, supplied by ATCC, used in various techniques. Bioz Stars score: 99/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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94
ATCC human breast non tumorigenic epithelial mcf 10a cells mcf10a
Oxidative stress in AG1522 CAFs that were cocultured with MDA-MB-231 or MCF7 breast cancer cell for 120 h. a Protein carbonylation demonstrating alterations in protein oxidation with both increased (~ 40 kDa) and decreased (~ 60 kDa) bands. b Induction of mitochondrial oxidative stress: the prevalence of superoxide anion (O 2 ·− ) was analyzed by MitoSOX™ Red and flow cytometry in AG1522 CAFs cocultured with MDA-MB-231 (light green histogram) or MCF7 (dark green histogram) breast cancer cells, and in AG1522 fibroblasts cocultured with <t>MCF10A</t> (purple histogram) non-tumorigenic breast epithelial cells or themselves (orange histogram) (control). Additional controls consisted of AG1522 fibroblasts without MitoSOX™ Red loading (red histogram) (negative control) and AG1522 fibroblasts treated with antimycin A (blue histogram) (positive control). AG1522 CAFs cocultured with MDA-MB-231 (light green) show a ten-fold increase in MitoSox™ levels over negative control (red). The histograms corresponding to AG1522 cocultures with MCF7 (dark green), MCF10A (purple), or AG1522 (orange) possess subpopulations of cells with a higher expression of MitoSOX™ Red (see appearance of bumps in tails of descending parts of the curves compared to the smoother lognormal shape in the negative control) than the larger population; however, no other significant changes were observed for these samples. c , d Modulation of antioxidant enzyme activity. Antioxidant enzyme activities in c AG1522 CAFs and d MDA-MB-231 cells cocultured with each other for 5, 48 or 120 h. Coculture with MDA-MB-231 resulted in an increased in MnSOD activity in AG1522 CAFs at 48 and 120 h. Additionally, although the enzyme activity remained unchanged, the catalase band appeared to run slower through the gel in AG1522 CAFs at 48 and 120 h. No changes were noted in CAF CuZnSOD or any of the antioxidant enzymes in the MDA-MB-231 lysate samples. Fold change = relative change. The results are representative of two separate experiments. In each experiment, 5 independent replicates were combined to generate enough cells for analysis
Human Breast Non Tumorigenic Epithelial Mcf 10a Cells Mcf10a, supplied by ATCC, used in various techniques. Bioz Stars score: 94/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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99
ATCC human bc cell lines
Oxidative stress in AG1522 CAFs that were cocultured with MDA-MB-231 or MCF7 breast cancer cell for 120 h. a Protein carbonylation demonstrating alterations in protein oxidation with both increased (~ 40 kDa) and decreased (~ 60 kDa) bands. b Induction of mitochondrial oxidative stress: the prevalence of superoxide anion (O 2 ·− ) was analyzed by MitoSOX™ Red and flow cytometry in AG1522 CAFs cocultured with MDA-MB-231 (light green histogram) or MCF7 (dark green histogram) breast cancer cells, and in AG1522 fibroblasts cocultured with <t>MCF10A</t> (purple histogram) non-tumorigenic breast epithelial cells or themselves (orange histogram) (control). Additional controls consisted of AG1522 fibroblasts without MitoSOX™ Red loading (red histogram) (negative control) and AG1522 fibroblasts treated with antimycin A (blue histogram) (positive control). AG1522 CAFs cocultured with MDA-MB-231 (light green) show a ten-fold increase in MitoSox™ levels over negative control (red). The histograms corresponding to AG1522 cocultures with MCF7 (dark green), MCF10A (purple), or AG1522 (orange) possess subpopulations of cells with a higher expression of MitoSOX™ Red (see appearance of bumps in tails of descending parts of the curves compared to the smoother lognormal shape in the negative control) than the larger population; however, no other significant changes were observed for these samples. c , d Modulation of antioxidant enzyme activity. Antioxidant enzyme activities in c AG1522 CAFs and d MDA-MB-231 cells cocultured with each other for 5, 48 or 120 h. Coculture with MDA-MB-231 resulted in an increased in MnSOD activity in AG1522 CAFs at 48 and 120 h. Additionally, although the enzyme activity remained unchanged, the catalase band appeared to run slower through the gel in AG1522 CAFs at 48 and 120 h. No changes were noted in CAF CuZnSOD or any of the antioxidant enzymes in the MDA-MB-231 lysate samples. Fold change = relative change. The results are representative of two separate experiments. In each experiment, 5 independent replicates were combined to generate enough cells for analysis
Human Bc Cell Lines, supplied by ATCC, used in various techniques. Bioz Stars score: 99/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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90
iCell Bioscience Inc human normal breast epithelial cell line mcf 10a
EO suppressed the viability of human TNBC cells. The viability of TNBC cell lines MDA-MB-231 and MDA-MB-453 and normal <t>epithelial</t> cell line <t>MCF</t> <t>10A</t> treated with different concentrations of EO for 24 h, 48 h, and 72 h measured by MTT. Unless otherwise specified, all results were presented as mean ± SD. n = 3. EO, Eupalinolide O; TNBC, Triple-negative breast cancer; MTT, 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide. # p < 0.05, and ## p < 0.01 vs. Control, in all figures.
Human Normal Breast Epithelial Cell Line Mcf 10a, supplied by iCell Bioscience Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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99
ATCC breast mcf 7 mda mb 231 mcf 10a control
Summary of the results of Irisin levels in in vitro model studies.
Breast Mcf 7 Mda Mb 231 Mcf 10a Control, supplied by ATCC, used in various techniques. Bioz Stars score: 99/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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94
ATCC mcf10a human mammary epithelial cells
( A ) Western blot analysis of indicated proteins in Lig4 − /− , Lig4 − /− : Trp53bp1 − /− , and Lig4 − /− : Lin37 − /− abl pre-B cells. ( B ) Flow cytometric analysis of chromatin-bound RPA (top) and γH2AX (bottom) before and after IR of non-cycling Lig4 − /− , Lig4 − /− : Trp53bp1 − /− , and Lig4 − /− : Lin37 − /− abl pre-B cells. The experiments were repeated in two independently generated cell lines at least twice. ( C ) Western blot analysis of RPA32 and phosphorylated RPA 32 (pRPA32(S4/S8)) of non-cycling Lig4 − /− , Lig4 −/− :Trp53bp1 − /− , and Lig4 − /− : Lin37 − /− abl pre-B cells treated without or with IR after indicated times. ( D ) Flow cytometric analysis of cycling and non-cycling Lig4 − /− , Lig4 − /− : Trp53bp1 − /− , and Lig4 − /− : Lin37 − /− abl pre-B cells for BrdU incorporation and DNA content (7-AAD). Percentage of cells in S-phase is indicated. ( E ) Representative images of IR-induced RPA foci in non-cycling Lig4 − /− , Lig4 − /− : Trp53bp1 − /− , and Lig4 − /− : Lin37 − /− abl pre-B cells from two independent experiments. ( F ) Western blot analysis of indicated proteins in WT, Trp53bp1 − /− , and Lin37 − /− <t>MCF10A</t> cells. ( G ) Flow cytometric analysis of BrdU pulsed cycling (top) or non-cycling (bottom) WT, Trp53bp1 − /− , and Lin37 − /− MCF10A cells as in ( D ). ( H, I ) Flow cytometric analysis of chromatin-bound RPA (top) and γH2AX (bottom) before or after IR of non-cycling WT and ( H ) Trp53bp1 − /− or ( I ) Lin37 − /− MCF10A cells. IR, ionizing radiation; WT, wild type.
Mcf10a Human Mammary Epithelial Cells, supplied by ATCC, used in various techniques. Bioz Stars score: 94/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Image Search Results


Oxidative stress in AG1522 CAFs that were cocultured with MDA-MB-231 or MCF7 breast cancer cell for 120 h. a Protein carbonylation demonstrating alterations in protein oxidation with both increased (~ 40 kDa) and decreased (~ 60 kDa) bands. b Induction of mitochondrial oxidative stress: the prevalence of superoxide anion (O 2 ·− ) was analyzed by MitoSOX™ Red and flow cytometry in AG1522 CAFs cocultured with MDA-MB-231 (light green histogram) or MCF7 (dark green histogram) breast cancer cells, and in AG1522 fibroblasts cocultured with MCF10A (purple histogram) non-tumorigenic breast epithelial cells or themselves (orange histogram) (control). Additional controls consisted of AG1522 fibroblasts without MitoSOX™ Red loading (red histogram) (negative control) and AG1522 fibroblasts treated with antimycin A (blue histogram) (positive control). AG1522 CAFs cocultured with MDA-MB-231 (light green) show a ten-fold increase in MitoSox™ levels over negative control (red). The histograms corresponding to AG1522 cocultures with MCF7 (dark green), MCF10A (purple), or AG1522 (orange) possess subpopulations of cells with a higher expression of MitoSOX™ Red (see appearance of bumps in tails of descending parts of the curves compared to the smoother lognormal shape in the negative control) than the larger population; however, no other significant changes were observed for these samples. c , d Modulation of antioxidant enzyme activity. Antioxidant enzyme activities in c AG1522 CAFs and d MDA-MB-231 cells cocultured with each other for 5, 48 or 120 h. Coculture with MDA-MB-231 resulted in an increased in MnSOD activity in AG1522 CAFs at 48 and 120 h. Additionally, although the enzyme activity remained unchanged, the catalase band appeared to run slower through the gel in AG1522 CAFs at 48 and 120 h. No changes were noted in CAF CuZnSOD or any of the antioxidant enzymes in the MDA-MB-231 lysate samples. Fold change = relative change. The results are representative of two separate experiments. In each experiment, 5 independent replicates were combined to generate enough cells for analysis

Journal: Cell Communication and Signaling : CCS

Article Title: Acquired radioresistance in cancer associated fibroblasts is concomitant with enhanced antioxidant potential and DNA repair capacity

doi: 10.1186/s12964-021-00711-4

Figure Lengend Snippet: Oxidative stress in AG1522 CAFs that were cocultured with MDA-MB-231 or MCF7 breast cancer cell for 120 h. a Protein carbonylation demonstrating alterations in protein oxidation with both increased (~ 40 kDa) and decreased (~ 60 kDa) bands. b Induction of mitochondrial oxidative stress: the prevalence of superoxide anion (O 2 ·− ) was analyzed by MitoSOX™ Red and flow cytometry in AG1522 CAFs cocultured with MDA-MB-231 (light green histogram) or MCF7 (dark green histogram) breast cancer cells, and in AG1522 fibroblasts cocultured with MCF10A (purple histogram) non-tumorigenic breast epithelial cells or themselves (orange histogram) (control). Additional controls consisted of AG1522 fibroblasts without MitoSOX™ Red loading (red histogram) (negative control) and AG1522 fibroblasts treated with antimycin A (blue histogram) (positive control). AG1522 CAFs cocultured with MDA-MB-231 (light green) show a ten-fold increase in MitoSox™ levels over negative control (red). The histograms corresponding to AG1522 cocultures with MCF7 (dark green), MCF10A (purple), or AG1522 (orange) possess subpopulations of cells with a higher expression of MitoSOX™ Red (see appearance of bumps in tails of descending parts of the curves compared to the smoother lognormal shape in the negative control) than the larger population; however, no other significant changes were observed for these samples. c , d Modulation of antioxidant enzyme activity. Antioxidant enzyme activities in c AG1522 CAFs and d MDA-MB-231 cells cocultured with each other for 5, 48 or 120 h. Coculture with MDA-MB-231 resulted in an increased in MnSOD activity in AG1522 CAFs at 48 and 120 h. Additionally, although the enzyme activity remained unchanged, the catalase band appeared to run slower through the gel in AG1522 CAFs at 48 and 120 h. No changes were noted in CAF CuZnSOD or any of the antioxidant enzymes in the MDA-MB-231 lysate samples. Fold change = relative change. The results are representative of two separate experiments. In each experiment, 5 independent replicates were combined to generate enough cells for analysis

Article Snippet: Human breast non-tumorigenic epithelial MCF 10A cells (MCF10A) (ATCC, CRL-10318) were grown in Dulbecco’s modified Eagle medium: nutrient mixture F-12 (DMEM/F12) (Corning CellGro) supplemented with 5% (vol/vol) horse serum (Invitrogen), 2 mM l -alanyl- l -glutamine, 2.5 μg/mL Amphotericin b, 0.02 μg/mL EGF, 0.5 μg/mL hydrocortisone, 10 μg/mL insulin, 0.1 μg/mL cholera toxin (Sigma), and 100 units/mL penicillin and 100 μg/mL streptomycin.

Techniques: Flow Cytometry, Control, Negative Control, Positive Control, Expressing, Activity Assay

Increased radioresistance of AG1522 CAFs requires coculture with cancer cells versus epithelial cells. Micronucleus formation in AG1522 cells cocultured for 120 h with MCF7 breast cancer cells or MCF10A non-tumorigenic breast epithelial cells, followed by exposure to 0.5 Gy of 137 Cs γ-rays. Fold changes in micronuclei are normalized to respective sham-irradiated (0 Gy) control. Coculture with MCF10A failed to protect the AG1522 fibroblasts from the radiation insult, whereas coculture with MCF7 significantly reduced the levels of micronuclei in irradiated CAFs. The results are representative of three separate experiments

Journal: Cell Communication and Signaling : CCS

Article Title: Acquired radioresistance in cancer associated fibroblasts is concomitant with enhanced antioxidant potential and DNA repair capacity

doi: 10.1186/s12964-021-00711-4

Figure Lengend Snippet: Increased radioresistance of AG1522 CAFs requires coculture with cancer cells versus epithelial cells. Micronucleus formation in AG1522 cells cocultured for 120 h with MCF7 breast cancer cells or MCF10A non-tumorigenic breast epithelial cells, followed by exposure to 0.5 Gy of 137 Cs γ-rays. Fold changes in micronuclei are normalized to respective sham-irradiated (0 Gy) control. Coculture with MCF10A failed to protect the AG1522 fibroblasts from the radiation insult, whereas coculture with MCF7 significantly reduced the levels of micronuclei in irradiated CAFs. The results are representative of three separate experiments

Article Snippet: Human breast non-tumorigenic epithelial MCF 10A cells (MCF10A) (ATCC, CRL-10318) were grown in Dulbecco’s modified Eagle medium: nutrient mixture F-12 (DMEM/F12) (Corning CellGro) supplemented with 5% (vol/vol) horse serum (Invitrogen), 2 mM l -alanyl- l -glutamine, 2.5 μg/mL Amphotericin b, 0.02 μg/mL EGF, 0.5 μg/mL hydrocortisone, 10 μg/mL insulin, 0.1 μg/mL cholera toxin (Sigma), and 100 units/mL penicillin and 100 μg/mL streptomycin.

Techniques: Irradiation, Control

Increased radioresistance of MRC5 CAFs is cancer cell dependent. Micronucleus formation in MRC5 CAFs cocultured for 120 h with MDA-MB-231 or MCF7 breast cancer cells, or MRC5 fibroblasts cocultured with MCF10A non-tumorigenic breast epithelial cells, followed by exposure to 1 Gy of 137 Cs γ-rays. The cells were γ-irradiated while in coculture. Fold changes in micronuclei are normalized to respective sham-irradiated (0 Gy) control. Only MRC5 CAFs cocultured with MDA-MB-231 demonstrated significantly increased resistance to ionizing radiation, when compared to control ( p < 0.05). The results are representative of three separate experiments

Journal: Cell Communication and Signaling : CCS

Article Title: Acquired radioresistance in cancer associated fibroblasts is concomitant with enhanced antioxidant potential and DNA repair capacity

doi: 10.1186/s12964-021-00711-4

Figure Lengend Snippet: Increased radioresistance of MRC5 CAFs is cancer cell dependent. Micronucleus formation in MRC5 CAFs cocultured for 120 h with MDA-MB-231 or MCF7 breast cancer cells, or MRC5 fibroblasts cocultured with MCF10A non-tumorigenic breast epithelial cells, followed by exposure to 1 Gy of 137 Cs γ-rays. The cells were γ-irradiated while in coculture. Fold changes in micronuclei are normalized to respective sham-irradiated (0 Gy) control. Only MRC5 CAFs cocultured with MDA-MB-231 demonstrated significantly increased resistance to ionizing radiation, when compared to control ( p < 0.05). The results are representative of three separate experiments

Article Snippet: Human breast non-tumorigenic epithelial MCF 10A cells (MCF10A) (ATCC, CRL-10318) were grown in Dulbecco’s modified Eagle medium: nutrient mixture F-12 (DMEM/F12) (Corning CellGro) supplemented with 5% (vol/vol) horse serum (Invitrogen), 2 mM l -alanyl- l -glutamine, 2.5 μg/mL Amphotericin b, 0.02 μg/mL EGF, 0.5 μg/mL hydrocortisone, 10 μg/mL insulin, 0.1 μg/mL cholera toxin (Sigma), and 100 units/mL penicillin and 100 μg/mL streptomycin.

Techniques: Irradiation, Control

EO suppressed the viability of human TNBC cells. The viability of TNBC cell lines MDA-MB-231 and MDA-MB-453 and normal epithelial cell line MCF 10A treated with different concentrations of EO for 24 h, 48 h, and 72 h measured by MTT. Unless otherwise specified, all results were presented as mean ± SD. n = 3. EO, Eupalinolide O; TNBC, Triple-negative breast cancer; MTT, 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide. # p < 0.05, and ## p < 0.01 vs. Control, in all figures.

Journal: Journal of Oncology

Article Title: Eupalinolide O Induces Apoptosis in Human Triple-Negative Breast Cancer Cells via Modulating ROS Generation and Akt/p38 MAPK Signaling Pathway

doi: 10.1155/2022/8802453

Figure Lengend Snippet: EO suppressed the viability of human TNBC cells. The viability of TNBC cell lines MDA-MB-231 and MDA-MB-453 and normal epithelial cell line MCF 10A treated with different concentrations of EO for 24 h, 48 h, and 72 h measured by MTT. Unless otherwise specified, all results were presented as mean ± SD. n = 3. EO, Eupalinolide O; TNBC, Triple-negative breast cancer; MTT, 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide. # p < 0.05, and ## p < 0.01 vs. Control, in all figures.

Article Snippet: Human normal breast epithelial cell line MCF 10A and TNBC cell lines (MDA-MB-231 cells and MDA-MB-453 cells) were gifted by iCell Bioscience Inc (Shanghai, China).

Techniques: Control

EO suppressed colony formation of human TNBC cells. The proliferation of MDA-MB-231, MDA-MB-453, and MCF 10A cells treated with different concentrations of EO detected by colony formation assay. n = 3.

Journal: Journal of Oncology

Article Title: Eupalinolide O Induces Apoptosis in Human Triple-Negative Breast Cancer Cells via Modulating ROS Generation and Akt/p38 MAPK Signaling Pathway

doi: 10.1155/2022/8802453

Figure Lengend Snippet: EO suppressed colony formation of human TNBC cells. The proliferation of MDA-MB-231, MDA-MB-453, and MCF 10A cells treated with different concentrations of EO detected by colony formation assay. n = 3.

Article Snippet: Human normal breast epithelial cell line MCF 10A and TNBC cell lines (MDA-MB-231 cells and MDA-MB-453 cells) were gifted by iCell Bioscience Inc (Shanghai, China).

Techniques: Colony Assay

Summary of the results of Irisin levels in in vitro model studies.

Journal: Cells

Article Title: The Role of Irisin in Cancer Disease

doi: 10.3390/cells10061479

Figure Lengend Snippet: Summary of the results of Irisin levels in in vitro model studies.

Article Snippet: Gannon et al. [ ] , Breast MCF-7 MDA-MB-231 MCF-10a- control (American Type Culture Collection; Manassas, VA, USA) , Human recombinant nonmodified Ir-INM Cayman Chemical (Ann Arbor, MI, USA) Human recombinant modified and active (glycosylated) Ir-IM PlexBio (San Francisco, CA, USA) Ir levels: 0.625–20 nM , Reduced number of cancer cells (INM), and migration (INM, IM) Induction of tumor cell apoptosis (INM) Inhibition of NF-κB activity (INM) Enhancement of the effect of Dox on cancer cells by Ir (INM at all tested concentrations; IM at 1.0 μgM) , [ ] .

Techniques: In Vitro, Recombinant, Control, Modification, Migration, Inhibition, Activity Assay

( A ) Western blot analysis of indicated proteins in Lig4 − /− , Lig4 − /− : Trp53bp1 − /− , and Lig4 − /− : Lin37 − /− abl pre-B cells. ( B ) Flow cytometric analysis of chromatin-bound RPA (top) and γH2AX (bottom) before and after IR of non-cycling Lig4 − /− , Lig4 − /− : Trp53bp1 − /− , and Lig4 − /− : Lin37 − /− abl pre-B cells. The experiments were repeated in two independently generated cell lines at least twice. ( C ) Western blot analysis of RPA32 and phosphorylated RPA 32 (pRPA32(S4/S8)) of non-cycling Lig4 − /− , Lig4 −/− :Trp53bp1 − /− , and Lig4 − /− : Lin37 − /− abl pre-B cells treated without or with IR after indicated times. ( D ) Flow cytometric analysis of cycling and non-cycling Lig4 − /− , Lig4 − /− : Trp53bp1 − /− , and Lig4 − /− : Lin37 − /− abl pre-B cells for BrdU incorporation and DNA content (7-AAD). Percentage of cells in S-phase is indicated. ( E ) Representative images of IR-induced RPA foci in non-cycling Lig4 − /− , Lig4 − /− : Trp53bp1 − /− , and Lig4 − /− : Lin37 − /− abl pre-B cells from two independent experiments. ( F ) Western blot analysis of indicated proteins in WT, Trp53bp1 − /− , and Lin37 − /− MCF10A cells. ( G ) Flow cytometric analysis of BrdU pulsed cycling (top) or non-cycling (bottom) WT, Trp53bp1 − /− , and Lin37 − /− MCF10A cells as in ( D ). ( H, I ) Flow cytometric analysis of chromatin-bound RPA (top) and γH2AX (bottom) before or after IR of non-cycling WT and ( H ) Trp53bp1 − /− or ( I ) Lin37 − /− MCF10A cells. IR, ionizing radiation; WT, wild type.

Journal: eLife

Article Title: LIN37-DREAM prevents DNA end resection and homologous recombination at DNA double-strand breaks in quiescent cells

doi: 10.7554/eLife.68466

Figure Lengend Snippet: ( A ) Western blot analysis of indicated proteins in Lig4 − /− , Lig4 − /− : Trp53bp1 − /− , and Lig4 − /− : Lin37 − /− abl pre-B cells. ( B ) Flow cytometric analysis of chromatin-bound RPA (top) and γH2AX (bottom) before and after IR of non-cycling Lig4 − /− , Lig4 − /− : Trp53bp1 − /− , and Lig4 − /− : Lin37 − /− abl pre-B cells. The experiments were repeated in two independently generated cell lines at least twice. ( C ) Western blot analysis of RPA32 and phosphorylated RPA 32 (pRPA32(S4/S8)) of non-cycling Lig4 − /− , Lig4 −/− :Trp53bp1 − /− , and Lig4 − /− : Lin37 − /− abl pre-B cells treated without or with IR after indicated times. ( D ) Flow cytometric analysis of cycling and non-cycling Lig4 − /− , Lig4 − /− : Trp53bp1 − /− , and Lig4 − /− : Lin37 − /− abl pre-B cells for BrdU incorporation and DNA content (7-AAD). Percentage of cells in S-phase is indicated. ( E ) Representative images of IR-induced RPA foci in non-cycling Lig4 − /− , Lig4 − /− : Trp53bp1 − /− , and Lig4 − /− : Lin37 − /− abl pre-B cells from two independent experiments. ( F ) Western blot analysis of indicated proteins in WT, Trp53bp1 − /− , and Lin37 − /− MCF10A cells. ( G ) Flow cytometric analysis of BrdU pulsed cycling (top) or non-cycling (bottom) WT, Trp53bp1 − /− , and Lin37 − /− MCF10A cells as in ( D ). ( H, I ) Flow cytometric analysis of chromatin-bound RPA (top) and γH2AX (bottom) before or after IR of non-cycling WT and ( H ) Trp53bp1 − /− or ( I ) Lin37 − /− MCF10A cells. IR, ionizing radiation; WT, wild type.

Article Snippet: WT and Lig4 −/− abl pre-B cells and MCF10A human mammary epithelial cells (from ATCC, CR-10317) used in this study all contain pCW-Cas9 (Addgene# 50661), which has a FLAG-tagged Cas9 cDNA under the control of a doxycycline-inducible promoter.

Techniques: Western Blot, Generated, BrdU Incorporation Assay

( A ) Western blot analysis (top) and flow cytometric analysis for chromatin-bound RPA after before or after IR (bottom) of non-cycling Lig4 − /− : Lin37 − /− abl pre-B cells with empty lentivirus or lentivirus expressing wild type (WT) LIN37 or the LIN37 (CD) mutant. Representative of three experiments. ( B ) Volcano plot of RNA-Seq analysis of non-cycling Lig4 − /− and Lig4 − /− : Lin37 − /− abl pre-B cells showing log2 values of the ratio of normalized transcript levels of Lig4 −/− :Lin37 −/− to Lig4 −/− cells (X-axis) and −log10 of the q-values of fold enrichment of each gene (Y-axis). The dashed line indicates q=0.05. Genes with q-values≤0.05 are denoted as red dots. ( C ) Western blot analysis of indicated proteins in cycling and non-cycling Lig4 − /− , Lig4 − /− : Trp53bp1 − /− , and Lig4 − /− : Lin37 − /− abl pre-B cells. ( D ) Western blot analysis of indicated proteins in cycling or non-cycling WT , Trp53bp1 − /− , and Lin37 − /− MCF10A cells. ( E ) Western blot analysis of indicated proteins in cycling and non-cycling Lig4 − /− : Lin37 − /− abl pre-B cells with empty lentivirus or lentivirus expressing WT LIN37 or the LIN37 (CD) mutant. HR, homologous recombination; IR, ionizing radiation; RNA-Seq, RNA sequencing. Figure 5—source data 1. RNA-Seq result and GO analysis in non-cycling Lig4 − /− and Lig4 − /− : Lin37 −/− abl pre-B cells. GO, gene ontology; RNA-Seq, RNA sequencing.

Journal: eLife

Article Title: LIN37-DREAM prevents DNA end resection and homologous recombination at DNA double-strand breaks in quiescent cells

doi: 10.7554/eLife.68466

Figure Lengend Snippet: ( A ) Western blot analysis (top) and flow cytometric analysis for chromatin-bound RPA after before or after IR (bottom) of non-cycling Lig4 − /− : Lin37 − /− abl pre-B cells with empty lentivirus or lentivirus expressing wild type (WT) LIN37 or the LIN37 (CD) mutant. Representative of three experiments. ( B ) Volcano plot of RNA-Seq analysis of non-cycling Lig4 − /− and Lig4 − /− : Lin37 − /− abl pre-B cells showing log2 values of the ratio of normalized transcript levels of Lig4 −/− :Lin37 −/− to Lig4 −/− cells (X-axis) and −log10 of the q-values of fold enrichment of each gene (Y-axis). The dashed line indicates q=0.05. Genes with q-values≤0.05 are denoted as red dots. ( C ) Western blot analysis of indicated proteins in cycling and non-cycling Lig4 − /− , Lig4 − /− : Trp53bp1 − /− , and Lig4 − /− : Lin37 − /− abl pre-B cells. ( D ) Western blot analysis of indicated proteins in cycling or non-cycling WT , Trp53bp1 − /− , and Lin37 − /− MCF10A cells. ( E ) Western blot analysis of indicated proteins in cycling and non-cycling Lig4 − /− : Lin37 − /− abl pre-B cells with empty lentivirus or lentivirus expressing WT LIN37 or the LIN37 (CD) mutant. HR, homologous recombination; IR, ionizing radiation; RNA-Seq, RNA sequencing. Figure 5—source data 1. RNA-Seq result and GO analysis in non-cycling Lig4 − /− and Lig4 − /− : Lin37 −/− abl pre-B cells. GO, gene ontology; RNA-Seq, RNA sequencing.

Article Snippet: WT and Lig4 −/− abl pre-B cells and MCF10A human mammary epithelial cells (from ATCC, CR-10317) used in this study all contain pCW-Cas9 (Addgene# 50661), which has a FLAG-tagged Cas9 cDNA under the control of a doxycycline-inducible promoter.

Techniques: Western Blot, Expressing, Mutagenesis, RNA Sequencing, Homologous Recombination

( A, B ) Western blot analysis of indicated proteins in cycling and non-cycling abl pre-B cells ( A ) or MCF10A cells ( B ). ( C, D ) Western blot analysis of indicated proteins in cycling G 1 or S/G 2 /M abl pre-B cells ( C ) or MCF10A cells ( D ), isolated by flow cytometric cell sorting based on the PIP-FUCCI reporter. Representative of two independent experiments. Asterisk indicates non-specific recognizing bands. ( E, F ) Flow cytometric analysis of chromatin-bound RPA and γH2AX before and after IR treatment of G 1 -phase Lig4 −/− , Lig4 −/− :Trp53bp1 − /− and Lig4 −/− :Lin37 − /− abl pre-B cells ( E ) or WT, Trp53bp1 − /− , and Lin37 − /− MCF10A cells ( F ). Representative of three experiments. IR, ionizing radiation; WT, wild type  . Figure 7—source data 1. RNA-Seq result and GO analysis in cycling G 1 Lig4 − /− and Lig4 − /− : Lin37 −/− abl pre-B cells. GO, gene ontology; RNA-Seq, RNA sequencing. Figure 7—source data 2. GO analysis of genes upregulated in non-cycling G 0 and/or cycling G 1 Lig4 − /− : Lin37 −/− abl pre-B cells. GO, gene ontology.

Journal: eLife

Article Title: LIN37-DREAM prevents DNA end resection and homologous recombination at DNA double-strand breaks in quiescent cells

doi: 10.7554/eLife.68466

Figure Lengend Snippet: ( A, B ) Western blot analysis of indicated proteins in cycling and non-cycling abl pre-B cells ( A ) or MCF10A cells ( B ). ( C, D ) Western blot analysis of indicated proteins in cycling G 1 or S/G 2 /M abl pre-B cells ( C ) or MCF10A cells ( D ), isolated by flow cytometric cell sorting based on the PIP-FUCCI reporter. Representative of two independent experiments. Asterisk indicates non-specific recognizing bands. ( E, F ) Flow cytometric analysis of chromatin-bound RPA and γH2AX before and after IR treatment of G 1 -phase Lig4 −/− , Lig4 −/− :Trp53bp1 − /− and Lig4 −/− :Lin37 − /− abl pre-B cells ( E ) or WT, Trp53bp1 − /− , and Lin37 − /− MCF10A cells ( F ). Representative of three experiments. IR, ionizing radiation; WT, wild type  . Figure 7—source data 1. RNA-Seq result and GO analysis in cycling G 1 Lig4 − /− and Lig4 − /− : Lin37 −/− abl pre-B cells. GO, gene ontology; RNA-Seq, RNA sequencing. Figure 7—source data 2. GO analysis of genes upregulated in non-cycling G 0 and/or cycling G 1 Lig4 − /− : Lin37 −/− abl pre-B cells. GO, gene ontology.

Article Snippet: WT and Lig4 −/− abl pre-B cells and MCF10A human mammary epithelial cells (from ATCC, CR-10317) used in this study all contain pCW-Cas9 (Addgene# 50661), which has a FLAG-tagged Cas9 cDNA under the control of a doxycycline-inducible promoter.

Techniques: Western Blot, Isolation, FACS, RNA Sequencing

( A, B ) Flow cytometric analysis of EdU incorporation and DNA content (7-AAD) of cycling Lig4 −/− , Lig4 −/− :Trp53bp1 − /− , and Lig4 −/− :Lin37 − /− abl pre-B cells ( A ) or cycling WT, Trp53bp1 − /− , and Lin37 − /− MCF10A cells ( B ). Cells were treated (+EdU) or not treated (−EdU) with EdU and analyses were carried out before or after IR. The percentage of G 1 -phase cells is shown. IR, ionizing radiation; WT, wild type.

Journal: eLife

Article Title: LIN37-DREAM prevents DNA end resection and homologous recombination at DNA double-strand breaks in quiescent cells

doi: 10.7554/eLife.68466

Figure Lengend Snippet: ( A, B ) Flow cytometric analysis of EdU incorporation and DNA content (7-AAD) of cycling Lig4 −/− , Lig4 −/− :Trp53bp1 − /− , and Lig4 −/− :Lin37 − /− abl pre-B cells ( A ) or cycling WT, Trp53bp1 − /− , and Lin37 − /− MCF10A cells ( B ). Cells were treated (+EdU) or not treated (−EdU) with EdU and analyses were carried out before or after IR. The percentage of G 1 -phase cells is shown. IR, ionizing radiation; WT, wild type.

Article Snippet: WT and Lig4 −/− abl pre-B cells and MCF10A human mammary epithelial cells (from ATCC, CR-10317) used in this study all contain pCW-Cas9 (Addgene# 50661), which has a FLAG-tagged Cas9 cDNA under the control of a doxycycline-inducible promoter.

Techniques: